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This Pre-Solicitation opportunity was posted on December 1, 2016. The submission period has ended. Browse the details below for market research, or find similar active opportunities.

Genome Sequencing Analysis

Closed
W81XWH-16-R-0012Federal

Contract Overview

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The U.S. Army Institute of Surgical Research Dental and Craniofacial Trauma Research and Tissue Regeneration Directorate is seeking a sole source contract for specialized Next Generation Sequencing services. The project focuses on whole-genome shotgun sequencing and RNA-sequencing to analyze viral, fungal, and bacterial communities within the microbiome of various chronic wounds. The selected provider must utilize high-throughput HiSeq NGS technology and possess the technical expertise to apply appropriate library preparation and sequencing chemistry to ensure high-quality reads and sufficient coverage for statistical analysis. In addition to sequencing, the contract requires a proficient bioinformatics group capable of performing assembly, annotation, and analysis of the resulting sequences. This comprehensive approach is intended to support infectious disease research, specifically targeting the metagenome and metatranscriptome of wound microbiomes. The procurement is identified under solicitation number W81XWH-16-R-0012 and falls under NAICS code 541712.

General Info

Agency

N/A

Contract Value

$87,881

NAICS

541712 - Research and Development in the Physical, Engineering, and Life Sciences (except Biotechnology)

Place of Performance

TBD, USA

Set-Aside

NONE

Award Issued Date

Documents

0

No documents available

Documents will appear here when they are available.

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Timeline

2 updates
PhaseClosed
Posted

Presolicitation

Justification (J&A)

Justification & Approval published

Notice updated

Response deadline changed from Jan 4, 2016 to Dec 31, 2016. The notice title changed. The notice description changed. The point of contact changed.

Response Deadline

Deadline has passed

Submission Closed

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Organization & Contact Information

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AgencyN/A
Contacts1 person available
OfficeN/A
Organization / Agency
N/A
Office AddressN/A
Contacts
David DanielContract Specialist

Full Description

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The U.S. Army Institute of Surgical Research (USAISR) Dental and Craniofacial Trauma Research and Tissue Regeneration Directorate has a need for Next Generation Sequencing (NGS) services using latest deep-sequencing, high-throughput, HiSeq NGS technology for whole-genome shotgun sequencing (metagenome) and RNA-sequencing (metatranscriptome) of viral, fungal and bacterial communities residing in the microbiome of major classes of chronic wounds. Prior expertise and proficiency is required to utilize the proper library prep and NGS sequencing chemistry (e.g., low-input versus high-input) for each task to generate high-quality sequenced reads with sufficient sequenced read length and coverage for statistically sound downstream computational analysis. A proficient bioinformatics group that provides expertise in assembly, annotation, and analysis of fungal, viral, and bacterial sequences is needed for the timely completion of downstream computational analyses for the different tasks described below.

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