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65 -- Obtain Viral Sequence from Samples Using Metagenomic Scale Sequencing

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00HCVHDB-2007-45013Federal

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The Centers for Disease Control and Prevention plans to issue a sole source purchase order to 454 Life Sciences for metagenomic scale sequencing of viral sample sequences. The contract involves library preparation by the 454 R&D group using eight samples containing low-titer virus sequences and ultra-broad PCR products. Sequencing will be performed using a 4-lane, 200 base pair protocol, with quality-filtered reads delivered in FASTA file format. This sequencing technology will complement existing Pan-Microbial array technology to identify unknown pathogens, utilizing a protocol developed in collaboration with Columbia University and optimized specifically for 454 Life Science sequencing technology. The procurement is justified under FAR provisions 6.302-1 and 6.302-2 as only one responsible source, 454 Life Sciences, can meet the requirements. No solicitation will be issued, and the purchase order is not set aside for small business. Interested parties may express their capability to meet this requirement. For contractual inquiries, Linda M. Young is the designated point of contact at the CDC. The contract is identified under solicitation number 00HCVHDB-2007-45013 with a NAICS code of 339999, relating to specialized sequencing services.

General Info

CDC contracts 454 Life Sciences for sole-source viral metagenomic sequencing using specialized 4-lane protocol.

Agency

N/A

NAICS

339999 - All Other Miscellaneous Manufacturing

Place of Performance

Not specified

Set-Aside

NONE

Documents

0

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special-notice

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Organization & Contact Information

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AgencyN/A
Contacts1 person available
OfficeN/A
Organization / Agency
N/A
Office AddressN/A
Contacts
Linda M YoungPurchasing Agent

Full Description

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The Centers for Disease Control and Prevention intends to issue a sole source purchase order to 454 Life Sciences, 16 Commercial Street, Branford, CT 06405, for metagenomic scale sequencing from viral sample sequences. Library preparation will be performed by the 454 R&D group using eight samples containing low-titer virus sequence and ultra broad PCR products. The resulting libraries will be sequenced using the 4-lane format and 200bp protocol, and the quality-filtered reads quality scores will be delivered to the customer in FASTA file format. This DNA sequencing technology will be used in conjunction with existing Pan-Microbial array technology for identification of unknown pathogens. This protocol was developed with collaborators at Columbia University and was designed and optimized for sequencing with 454 Life Science sequencing technology. CDC believes that this requirement is met by only one provider. This procurement will be processed under the authority of FAR 6.302-1 and 6.302-2. Only one responsible source and no other sources will satisfy agency requirements. No solicitation is being issued. Interested persons may identify their interest and capability to respond to this requirement. This procurement is not set-aside for small business. For contractual questions contact Linda M. Young.

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