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This Combined Synopsis/Solicitation opportunity from Department Of Agriculture was posted on February 4, 2010. The submission period has ended. Browse the details below for market research, or find similar active opportunities.

Genetic Mapping software with SCL

Closed
AG-0208-CC-10-00254Federal

Contract Overview

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General Info

NAICS

511210 - Software Publishers

Place of Performance

USDA, ARS, NWISRL 3793 N. 3600 E, KIMBERLY, ID, 83341, USA

Set-Aside

NONE

Documents

0

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Timeline

PhaseClosed
Posted

Combined Synopsis

Response Deadline

Deadline has passed

Submission Closed

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Organization & Contact Information

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AgencyDepartment Of Agriculture → USDA Ars Pwa Aao Acq/per Prop
Contacts2 people available
OfficeALBANY, CA, 94710, USA
Office AddressALBANY, CA, 94710, USA
Contacts
Shelley C SteenPurchasing Agent
Dr. Imad EujaylResearch Plant Molecular Biologist

Full Description

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Software is needed for: - 1. Calculating genetic linkage maps from a large data of genotypic DNA markers in a Sugar beet F2 population. - 2. To assign DNA markers from previous genetic maps to the new genetic map. - 3. To join previous maps with the new map - 4. Analyze quantitative trait loci in F2 population. - 5. To be MS-windows compatible and capable of drawing linkage group charts, but in note- pad or postscript format. Specifications of software to be: - 1. A new special feature known as Strongest Cross Link (SCL) permits accurate assignment of markers to linkage groups (chromosomes) - 2. Capable to employ previously assigned markers to linkage groups to be used in new populations - 3. There are two algorithms to select from (reg. and ML) for calculating genetic distances. - 4. Capable of analyzing large set of data compared to other genetic mapping software - 5. Efficient in importing large data sets such as DArT from Excel spread sheet - 6. High quality map charting of calculated genetic map. - 7. Complete compatibility with MS-Windows and Adobe pdf format

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