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Avian Microbiome Bioinformatic Analysis

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Grant

Response Deadline01/05/2027, 05:00:00 AM UTC

Contract Overview

Solicitation details, issuing organization, response deadlines, documents, and interested companies for this government contract opportunity.

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The Avian Microbiome Bioinformatic Analysis subcontract supports the US Geological Survey Eastern Ecological Science Center by providing advanced bioinformatic services for prime contractors. The scope of work focuses on the identification of viruses, prokaryotic, and eukaryotic microorganisms through genome assembly-based analysis of shotgun metatranscriptomic data. To achieve this, the contractor is responsible for developing analytical models and reproducible bioinformatic workflows utilizing cloud infrastructure or high-performance computing clusters. Key deliverables for this engagement include processed datasets, reproducible pipelines, and contributions to peer-reviewed scientific publications. This opportunity falls under NAICS code 541715 and is managed under the Department of the Interior. Interested parties should note the response deadline of January 5, 2027.

General Info

Bioinformatic analysis of avian microbiome data for USGS, due January 5, 2027.

Agency

Department Of The Interior → US Geological Survey

NAICS

541715 - Research and Development in the Physical, Engineering, and Life Sciences (except Nanotechnology and Biotechnology)

Place of Performance

Not specified

Set-Aside

NONE

Documents

This scope was carved out of G27AS00064.

The full solicitation package (5 documents), including the RFP, is on the prime solicitation, not on this scope.

View the prime solicitation

Cooperative Agreement for affiliated Partner with Gulf Coast Cooperative Ecosystem Studies Unit

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Timeline

PostedNov 5

subcontract

Response DeadlineJan 5

Submission deadline

Response Deadline

01/05/2027, 05:00:00 AM UTCin about 2 months

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Organization & Contact Information

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AgencyDepartment Of The Interior → US Geological Survey

ContactsNo contacts available

OfficeN/A

Organization / Agency

Department Of The Interior → US Geological Survey

Office AddressN/A

ContactsNo contact information available

Full Description

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Performs advanced bioinformatic analysis for prime contractors on USGS Eastern Ecological Science Center projects. Conducts genome assembly-based identification of viruses, prokaryotic, and eukaryotic microorganisms using shotgun metatranscriptomic data. Develops reproducible bioinformatic workflows and analytical models using HPC clusters or cloud infrastructure. Delivers processed datasets, reproducible pipelines, and contributions to peer-reviewed publications.

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